BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A09SP1|AL428150
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1009 1949 0.0
>3x_Contig1009
Length = 4650
Score = 1949 bits (980), Expect = 0.0
Identities = 992/998 (99%), Gaps = 1/998 (0%)
Strand = Plus / Minus
Query: 1 gatccctatatcctccatagcccttatctatcttttgacaccgttggagttgcgccaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4144 gatccctatatcctccatagcccttatctatcttttgacaccgttggagttgcgccaggc 4085
Query: 61 gctas-attgatcatacctggtcatctgctctatttcattgacgaggcaatgagcaagac 119
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4084 gctagcattgatcatacctggtcatctgctctatttcattgacgaggcaatgagcaagac 4025
Query: 120 gtacggactcaatatttgaaagttctatgttcagatgtgtttgtatatatttatatatga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4024 gtacggactcaatatttgaaagttctatgttcagatgtgtttgtatatatttatatatga 3965
Query: 180 acgtttcttaaatgacattatttatatgataatttcacggtgtatagcagtgaaataact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3964 acgtttcttaaatgacattatttatatgataatttcacggtgtatagcagtgaaataact 3905
Query: 240 ttttaaagtatctctttttcatgacattaatgagacatcttcatgtattgccgatgaatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3904 ttttaaagtatctctttttcatgacattaatgagacatcttcatgtattgccgatgaatc 3845
Query: 300 tgtttgcttytttttcttcttaacgggccatggcaatgaatggttgcgttctttcgttaa 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3844 tgtttgcttctttttcttcttaacgggccatggcaatgaatggttgcgttctttcgttaa 3785
Query: 360 taatctactgcatttattggaaatatgggaaatgtcatgtttctttgtttggttgttcac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3784 taatctactgcatttattggaaatatgggaaatgtcatgtttctttgtttggttgttcac 3725
Query: 420 attcaatgctctcttcagtgtccgcactggtgggttgataaggatgtcagatatatcgga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3724 attcaatgctctcttcagtgtccgcactggtgggttgataaggatgtcagatatatcgga 3665
Query: 480 aatgttgatttcatggattttggccacttgctctataagttttgattcgtctgattcttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3664 aatgttgatttcatggattttggccacttgctctataagttttgattcgtctgattcttt 3605
Query: 540 cacatcaggttgataatttagtagcgattgtmatgggtctttgaagacttcagcttctgg 599
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3604 cacatcaggttgataatttagtagcgattgtaatgggtctttgaagacttcagcttctgg 3545
Query: 600 accttgatttaaaattttcaagttttcctctcgttcttgatcctcatgcaattgttttaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3544 accttgatttaaaattttcaagttttcctctcgttcttgatcctcatgcaattgttttaa 3485
Query: 660 cagctctttcagatcggtatcgtagttcttgttcaagtctggtagtaattcagtcaactg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3484 cagctctttcagatcggtatcgtagttcttgttcaagtctggtagtaattcagtcaactg 3425
Query: 720 tcttgatattgtttgcaagctcaccttatcacttggatatttgaatatttccaagttatt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3424 tcttgatattgtttgcaagctcaccttatcacttggatatttgaatatttccaagttatt 3365
Query: 780 atatatamcgtattcaggacttgtcaaggaattgaaaaacaaagtagattgtttctctat 839
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3364 atatataacgtattcaggacttgtcaaggaattgaaaaacaaagtagattgtttctctat 3305
Query: 840 caaatcgttaaactggttaacaaaatgcgtatcaacatgaatagtttccttcaaatcttg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3304 caaatcgttaaactggttaacaaaatgcgtatcaacatgaatagtttccttcaaatcttg 3245
Query: 900 tgggttatattcaggtcttgagattttcaaaagagtcgtagcggaagtttgacctgttct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3244 tgggttatattcaggtcttgagattttcaaaagagtcgtagcggaagtttgacctgttct 3185
Query: 960 gctctgcattcgttcatcctcgtcaaaggraatgtctt 997
||||||||||||||||||||||||||||| ||||||||
Sbjct: 3184 gctctgcattcgttcatcctcgtcaaaggaaatgtctt 3147
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8978
Number of Sequences: 1807
Number of extensions: 8978
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)